Commit 2959733e authored by Jan Reimes's avatar Jan Reimes
Browse files

🛠️ chore(tools): update mise config and add CytoScnPy tool

parent 9d8d53e0

.config/mise/config.toml

+9 −4
Original line number Diff line number Diff line 
[tools]

"aqua:steveyegge/beads" = "latest"

"github:yoanbernabeu/grepai" = "latest"

"github:djinn-soul/CytoScnPy" = "latest"

node = "latest"

bun = "latest"
@@ -12,7 +13,7 @@ run = "mise tasks" 


[tasks.upgrade-tools]

description = "Upgrade all development tools to their latest versions"

run = "mise up"

run = ["mise install", "mise up", "mise prune"]



[tasks.env-sync]

description = "Sync the virtual environment with pyproject.toml dependencies"
@@ -63,18 +64,22 @@ arg "[script]" help="Script variant to use: sh (bash/zsh) or ps (PowerShell)" de 
run = ["cls", "uv run specify init --here --ai {{usage.ai_agent}} --script {{usage.script}}", "uv run specify check"]



[tasks.add-mcp-servers]



depends = ["upgrade-tools", "env-sync"]



usage = '''

arg "<ai_agent>" help="AI assistant to use: claude, gemini, copilot, opencode, ... see: https://github.com/neondatabase/add-mcp"

'''

shell = "pwsh -NoProfile -Command"

run = [

    'cls',

    'bun x add-mcp -y -a {{usage.ai_agent}} "grepai mcp-serve"',

    'bun x add-mcp  -y -a {{usage.ai_agent}} -n teddi-mcp "uv run -m teddi_mcp server"'

    'bun x add-mcp -y -a {{usage.ai_agent}} -n teddi-mcp "uv run -m teddi_mcp server"',

    'bun x add-mcp -y -a {{usage.ai_agent}} -n cytoscnpy-mcp "cytoscnpy mcp-server"'

]



[tasks.add-skills]

run = [

    "@echo off",

    "cls",

    "bun x skills add https://github.com/nicobailon/visual-explainer -a universal -y",

    "bun x skills add https://github.com/alinaqi/claude-bootstrap -s code-deduplication -a universal -y",

pyproject.toml

+1 −1
Original line number Diff line number Diff line
@@ -10,7 +10,7 @@ classifiers = [ 
    "Intended Audience :: Developers",

    "Programming Language :: Python",

    "Programming Language :: Python :: 3",

    "Programming Language :: Python :: 3.14",

    "Programming Language :: Python :: 3.13",

    "Topic :: Software Development :: Libraries :: Python Modules",

]